Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb20Q91XZ9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Gm12813-201ENSMUST00000119615 902 ntBASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Gm24841-201ENSMUST00000158676 357 ntBASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb20Q91XZ9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Gm27463-201ENSMUST00000183569 57 ntBASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb20Q91XZ9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb20Q91XZ9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Gm43799-201ENSMUST00000201845 579 ntBASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb20Q91XZ9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb20Q91XZ9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Gm13899-201ENSMUST00000121519 1255 ntBASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Gm45574-201ENSMUST00000210921 331 ntBASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb20Q91XZ9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms