Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Gm7638-201ENSMUST00000121348 967 ntBASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Gm10252-201ENSMUST00000209541 832 ntBASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb22Q91XZ8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb22Q91XZ8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb22Q91XZ8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Gm37055-201ENSMUST00000191866 133 ntBASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Pcdhb22Q91XZ8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pcdhb22Q91XZ8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Gm9731-201ENSMUST00000209480 747 ntBASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb22Q91XZ8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Gm5417-201ENSMUST00000079706 384 ntBASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb22Q91XZ8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb22Q91XZ8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb22Q91XZ8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms