Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb6Q91XZ4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb6Q91XZ4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb6Q91XZ4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb6Q91XZ4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pcdhb6Q91XZ4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb6Q91XZ4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb6Q91XZ4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb6Q91XZ4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb6Q91XZ4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb6Q91XZ4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcdhb6Q91XZ4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb6Q91XZ4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb6Q91XZ4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb6Q91XZ4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb6Q91XZ4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb6Q91XZ4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb6Q91XZ4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb6Q91XZ4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Gm27011-201ENSMUST00000182352 972 ntBASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Pcdhb6Q91XZ4 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhb6Q91XZ4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb6Q91XZ4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms