Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga11Q91XY8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga11Q91XY8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga11Q91XY8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga11Q91XY8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga11Q91XY8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhga11Q91XY8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga11Q91XY8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga11Q91XY8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Gm10138-203ENSMUST00000206952 366 ntBASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Gm20049-201ENSMUST00000219950 730 ntBASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga11Q91XY8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Gm11643-201ENSMUST00000119578 864 ntBASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Mir8112-201ENSMUST00000184382 131 ntBASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Dio3-201ENSMUST00000097228 1449 ntBASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhga11Q91XY8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga11Q91XY8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga11Q91XY8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms