Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga3Q91XY5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhga3Q91XY5 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.46■□□□□ 0.07
Pcdhga3Q91XY5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga3Q91XY5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga3Q91XY5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga3Q91XY5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga3Q91XY5 Idnk-204ENSMUST00000226010 1898 ntBASIC15.46■□□□□ 0.06
Pcdhga3Q91XY5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Gm29257-201ENSMUST00000186115 639 ntBASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Gm8969-201ENSMUST00000199694 526 ntBASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga3Q91XY5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Gm11249-201ENSMUST00000117071 859 ntBASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Gm10138-203ENSMUST00000206952 366 ntBASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Mtag2-201ENSMUST00000058665 714 ntBASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga3Q91XY5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Pcdhga3Q91XY5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Gm10418-201ENSMUST00000100943 576 ntBASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.42■□□□□ 0.06
Pcdhga3Q91XY5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga3Q91XY5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhga3Q91XY5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga3Q91XY5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga3Q91XY5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms