Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Gm24841-201ENSMUST00000158676 357 ntBASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Gm27463-201ENSMUST00000183569 57 ntBASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhgb1Q91XX8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Idnk-204ENSMUST00000226010 1898 ntBASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhgb1Q91XX8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhgb1Q91XX8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhgb1Q91XX8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
Pcdhgb1Q91XX8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Gm18959-201ENSMUST00000208954 655 ntBASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhgb1Q91XX8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhgb1Q91XX8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms