Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Gm42778-201ENSMUST00000199644 553 ntBASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Gm42790-201ENSMUST00000201268 969 ntBASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Gm10493-201ENSMUST00000097270 612 ntBASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhgc3Q91XX1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Gm15039-201ENSMUST00000118914 875 ntBASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhgc3Q91XX1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhgc3Q91XX1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Mir8112-201ENSMUST00000184382 131 ntBASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhgc3Q91XX1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhgc3Q91XX1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms