Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.13■□□□□ 0.33
Usb1Q91W78 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usb1Q91W78 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usb1Q91W78 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.13■□□□□ 0.33
Usb1Q91W78 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usb1Q91W78 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usb1Q91W78 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usb1Q91W78 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usb1Q91W78 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.12■□□□□ 0.33
Usb1Q91W78 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Usb1Q91W78 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usb1Q91W78 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.12■□□□□ 0.33
Usb1Q91W78 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Usb1Q91W78 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usb1Q91W78 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usb1Q91W78 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.12■□□□□ 0.33
Usb1Q91W78 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usb1Q91W78 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usb1Q91W78 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.11■□□□□ 0.33
Usb1Q91W78 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.11■□□□□ 0.33
Usb1Q91W78 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.11■□□□□ 0.33
Usb1Q91W78 Mir6982-201ENSMUST00000184354 68 ntBASIC17.11■□□□□ 0.33
Usb1Q91W78 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.11■□□□□ 0.33
Usb1Q91W78 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.11■□□□□ 0.33
Usb1Q91W78 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usb1Q91W78 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usb1Q91W78 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usb1Q91W78 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usb1Q91W78 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Usb1Q91W78 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usb1Q91W78 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Usb1Q91W78 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usb1Q91W78 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usb1Q91W78 Gm715-201ENSMUST00000117865 831 ntBASIC17.1■□□□□ 0.33
Usb1Q91W78 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.1■□□□□ 0.33
Usb1Q91W78 Gm18025-201ENSMUST00000221733 862 ntBASIC17.1■□□□□ 0.33
Usb1Q91W78 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usb1Q91W78 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Usb1Q91W78 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.1■□□□□ 0.33
Usb1Q91W78 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usb1Q91W78 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.1■□□□□ 0.33
Usb1Q91W78 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usb1Q91W78 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usb1Q91W78 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Usb1Q91W78 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usb1Q91W78 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usb1Q91W78 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Usb1Q91W78 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.09■□□□□ 0.33
Usb1Q91W78 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Usb1Q91W78 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usb1Q91W78 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.09■□□□□ 0.33
Usb1Q91W78 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Gm13401-201ENSMUST00000117074 291 ntBASIC17.09■□□□□ 0.33
Usb1Q91W78 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Gm29791-202ENSMUST00000207888 369 ntBASIC17.09■□□□□ 0.33
Usb1Q91W78 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Usb1Q91W78 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.09■□□□□ 0.33
Usb1Q91W78 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Usb1Q91W78 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Usb1Q91W78 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usb1Q91W78 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usb1Q91W78 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usb1Q91W78 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.08■□□□□ 0.33
Usb1Q91W78 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.08■□□□□ 0.33
Usb1Q91W78 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.08■□□□□ 0.33
Usb1Q91W78 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Usb1Q91W78 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms