Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Gm10231-201ENSMUST00000181584 441 ntBASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Gm10175-202ENSMUST00000208752 441 ntBASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx41Q91VN6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx41Q91VN6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Ddx41Q91VN6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx41Q91VN6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Ddx41Q91VN6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx41Q91VN6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx41Q91VN6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx41Q91VN6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx41Q91VN6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx41Q91VN6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx41Q91VN6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx41Q91VN6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ddx41Q91VN6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Gm11539-201ENSMUST00000119837 557 ntBASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Gm13436-201ENSMUST00000120418 567 ntBASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Gm13559-201ENSMUST00000120476 863 ntBASIC19.88■□□□□ 0.77
Ddx41Q91VN6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx41Q91VN6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx41Q91VN6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.86■□□□□ 0.77
Ddx41Q91VN6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx41Q91VN6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx41Q91VN6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms