Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Gm18363-201ENSMUST00000221671 730 ntBASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhb17Q91VD8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Gm12085-201ENSMUST00000119263 940 ntBASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Gm37055-201ENSMUST00000191866 133 ntBASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhb17Q91VD8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Gm5244-202ENSMUST00000189517 743 ntBASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhb17Q91VD8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Gm19324-201ENSMUST00000213229 1169 ntBASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhb17Q91VD8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 Mir6982-201ENSMUST00000184354 68 ntBASIC17.95■□□□□ 0.46
Pcdhb17Q91VD8 AC125117.2-201ENSMUST00000228344 1140 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms