Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Golph3-205ENSMUST00000228671 2842 ntBASIC20.82■□□□□ 0.92
StrcQ8VIM6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
StrcQ8VIM6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
StrcQ8VIM6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.82■□□□□ 0.92
StrcQ8VIM6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.81■□□□□ 0.92
StrcQ8VIM6 Gm27867-201ENSMUST00000184778 125 ntBASIC20.81■□□□□ 0.92
StrcQ8VIM6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.81■□□□□ 0.92
StrcQ8VIM6 Gm44450-201ENSMUST00000199528 114 ntBASIC20.81■□□□□ 0.92
StrcQ8VIM6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
StrcQ8VIM6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrcQ8VIM6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrcQ8VIM6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
StrcQ8VIM6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrcQ8VIM6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrcQ8VIM6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrcQ8VIM6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.81■□□□□ 0.92
StrcQ8VIM6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrcQ8VIM6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrcQ8VIM6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
StrcQ8VIM6 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.8■□□□□ 0.92
StrcQ8VIM6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrcQ8VIM6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
StrcQ8VIM6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrcQ8VIM6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
StrcQ8VIM6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.8■□□□□ 0.92
StrcQ8VIM6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrcQ8VIM6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
StrcQ8VIM6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrcQ8VIM6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
StrcQ8VIM6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.8■□□□□ 0.92
StrcQ8VIM6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
StrcQ8VIM6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
StrcQ8VIM6 Gm6296-201ENSMUST00000222599 943 ntBASIC20.79■□□□□ 0.92
StrcQ8VIM6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrcQ8VIM6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrcQ8VIM6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrcQ8VIM6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrcQ8VIM6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrcQ8VIM6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrcQ8VIM6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrcQ8VIM6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
StrcQ8VIM6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.79■□□□□ 0.92
StrcQ8VIM6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
StrcQ8VIM6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
StrcQ8VIM6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
StrcQ8VIM6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
StrcQ8VIM6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
StrcQ8VIM6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.77■□□□□ 0.92
StrcQ8VIM6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
StrcQ8VIM6 Rprl3-201ENSMUST00000157400 290 ntBASIC20.77■□□□□ 0.92
StrcQ8VIM6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
StrcQ8VIM6 Gm27702-201ENSMUST00000184512 56 ntBASIC20.77■□□□□ 0.92
StrcQ8VIM6 Gm10060-201ENSMUST00000212002 111 ntBASIC20.77■□□□□ 0.92
StrcQ8VIM6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
StrcQ8VIM6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
StrcQ8VIM6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
StrcQ8VIM6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
StrcQ8VIM6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
StrcQ8VIM6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.75■□□□□ 0.91
StrcQ8VIM6 Gm5364-201ENSMUST00000216789 889 ntBASIC20.75■□□□□ 0.91
StrcQ8VIM6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms