Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rprd1aQ8VDS4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Gm3375-201ENSMUST00000203929 796 ntBASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rprd1aQ8VDS4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.85■□□□□ 0.45
Rprd1aQ8VDS4 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.85■□□□□ 0.45
Rprd1aQ8VDS4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rprd1aQ8VDS4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rprd1aQ8VDS4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rprd1aQ8VDS4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rprd1aQ8VDS4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rprd1aQ8VDS4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rprd1aQ8VDS4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rprd1aQ8VDS4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rprd1aQ8VDS4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Gm24841-201ENSMUST00000158676 357 ntBASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Mir8112-201ENSMUST00000184382 131 ntBASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rprd1aQ8VDS4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Rprd1aQ8VDS4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Rprd1aQ8VDS4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rprd1aQ8VDS4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Gm15565-201ENSMUST00000118890 427 ntBASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Gm38027-201ENSMUST00000192315 235 ntBASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rprd1aQ8VDS4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Gm30025-201ENSMUST00000218555 728 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms