Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Trmt13-210ENSMUST00000198454 880 ntBASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20aQ8VDB9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20aQ8VDB9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc6a20aQ8VDB9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc6a20aQ8VDB9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Slc6a20aQ8VDB9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a20aQ8VDB9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a20aQ8VDB9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.11■□□□□ 0.33
Slc6a20aQ8VDB9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms