Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chrna3Q8R4G9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chrna3Q8R4G9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Gm43799-201ENSMUST00000201845 579 ntBASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chrna3Q8R4G9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna3Q8R4G9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna3Q8R4G9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms