Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Gm13534-201ENSMUST00000121169 513 ntBASIC17.56■□□□□ 0.4
Slf1Q8R3P9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.56■□□□□ 0.4
Slf1Q8R3P9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf1Q8R3P9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf1Q8R3P9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slf1Q8R3P9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.53■□□□□ 0.4
Slf1Q8R3P9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms