Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tm6sf2Q8R1J1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tm6sf2Q8R1J1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tm6sf2Q8R1J1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tm6sf2Q8R1J1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tm6sf2Q8R1J1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.33■□□□□ 0.2
Tm6sf2Q8R1J1 Mir8112-201ENSMUST00000184382 131 ntBASIC16.33■□□□□ 0.2
Tm6sf2Q8R1J1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.33■□□□□ 0.2
Tm6sf2Q8R1J1 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.33■□□□□ 0.2
Tm6sf2Q8R1J1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tm6sf2Q8R1J1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tm6sf2Q8R1J1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tm6sf2Q8R1J1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tm6sf2Q8R1J1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Tm6sf2Q8R1J1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tm6sf2Q8R1J1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tm6sf2Q8R1J1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tm6sf2Q8R1J1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Tm6sf2Q8R1J1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tm6sf2Q8R1J1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tm6sf2Q8R1J1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tm6sf2Q8R1J1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Gm43799-201ENSMUST00000201845 579 ntBASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Tm6sf2Q8R1J1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tm6sf2Q8R1J1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Gm11539-201ENSMUST00000119837 557 ntBASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Gm13436-201ENSMUST00000120418 567 ntBASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tm6sf2Q8R1J1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tm6sf2Q8R1J1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tm6sf2Q8R1J1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tm6sf2Q8R1J1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tm6sf2Q8R1J1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Tm6sf2Q8R1J1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tm6sf2Q8R1J1 Gm27463-201ENSMUST00000183569 57 ntBASIC16.28■□□□□ 0.2
Tm6sf2Q8R1J1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms