Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Rpp40Q8R1F9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.63■□□□□ 0.57
Rpp40Q8R1F9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpp40Q8R1F9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rpp40Q8R1F9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Gm17661-201ENSMUST00000170317 270 ntBASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Gm8969-201ENSMUST00000199694 526 ntBASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpp40Q8R1F9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Rpp40Q8R1F9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rpp40Q8R1F9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp40Q8R1F9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp40Q8R1F9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rpp40Q8R1F9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp40Q8R1F9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp40Q8R1F9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp40Q8R1F9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp40Q8R1F9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpp40Q8R1F9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Rpp40Q8R1F9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.58■□□□□ 0.57
Rpp40Q8R1F9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.58■□□□□ 0.57
Rpp40Q8R1F9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.58■□□□□ 0.57
Rpp40Q8R1F9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rpp40Q8R1F9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpp40Q8R1F9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Il3ra-202ENSMUST00000223589 738 ntBASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Rpp40Q8R1F9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpp40Q8R1F9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.56■□□□□ 0.56
Rpp40Q8R1F9 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms