Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Gm8969-201ENSMUST00000199694 526 ntBASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sf3a1Q8K4Z5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Timm23-208ENSMUST00000226683 750 ntBASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sf3a1Q8K4Z5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Gm24841-201ENSMUST00000158676 357 ntBASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Gm21814-202ENSMUST00000203277 873 ntBASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sf3a1Q8K4Z5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Gm12085-201ENSMUST00000119263 940 ntBASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sf3a1Q8K4Z5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Odf3b-204ENSMUST00000227834 930 ntBASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sf3a1Q8K4Z5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
Sf3a1Q8K4Z5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Sf3a1Q8K4Z5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sf3a1Q8K4Z5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Sf3a1Q8K4Z5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3a1Q8K4Z5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3a1Q8K4Z5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sf3a1Q8K4Z5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms