Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ebf4Q8K4J2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ebf4Q8K4J2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ebf4Q8K4J2 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Mir8112-201ENSMUST00000184382 131 ntBASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Gm43173-201ENSMUST00000202246 593 ntBASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf4Q8K4J2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms