Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shtn1Q8K2Q9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Shtn1Q8K2Q9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Shtn1Q8K2Q9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shtn1Q8K2Q9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Shtn1Q8K2Q9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shtn1Q8K2Q9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.44■□□□□ 0.86
Shtn1Q8K2Q9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shtn1Q8K2Q9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Shtn1Q8K2Q9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shtn1Q8K2Q9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Shtn1Q8K2Q9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shtn1Q8K2Q9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Shtn1Q8K2Q9 Gm10418-201ENSMUST00000100943 576 ntBASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shtn1Q8K2Q9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.39■□□□□ 0.86
Shtn1Q8K2Q9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Shtn1Q8K2Q9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shtn1Q8K2Q9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shtn1Q8K2Q9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 Gm5864-201ENSMUST00000202263 970 ntBASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shtn1Q8K2Q9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms