Protein–RNA interactions for Protein: Q8K268

Abcf3, ATP-binding cassette sub-family F member 3, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf3Q8K268 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.46■□□□□ 0.39
Abcf3Q8K268 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.46■□□□□ 0.39
Abcf3Q8K268 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf3Q8K268 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf3Q8K268 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf3Q8K268 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Abcf3Q8K268 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.45■□□□□ 0.38
Abcf3Q8K268 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.45■□□□□ 0.38
Abcf3Q8K268 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.45■□□□□ 0.38
Abcf3Q8K268 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.45■□□□□ 0.38
Abcf3Q8K268 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf3Q8K268 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf3Q8K268 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Gm18284-201ENSMUST00000172604 624 ntBASIC17.44■□□□□ 0.38
Abcf3Q8K268 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Gm38205-201ENSMUST00000192243 258 ntBASIC17.44■□□□□ 0.38
Abcf3Q8K268 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf3Q8K268 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.43■□□□□ 0.38
Abcf3Q8K268 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf3Q8K268 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.42■□□□□ 0.38
Abcf3Q8K268 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Gm13234-201ENSMUST00000120010 747 ntBASIC17.42■□□□□ 0.38
Abcf3Q8K268 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf3Q8K268 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf3Q8K268 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Gm42778-201ENSMUST00000199644 553 ntBASIC17.41■□□□□ 0.38
Abcf3Q8K268 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Gm5874-201ENSMUST00000096101 508 ntBASIC17.41■□□□□ 0.38
Abcf3Q8K268 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.41■□□□□ 0.38
Abcf3Q8K268 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abcf3Q8K268 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms