Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Gm7213-201ENSMUST00000215977 950 ntBASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depdc1aQ8CIG0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Depdc1aQ8CIG0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.55■□□□□ 0.72
Depdc1aQ8CIG0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Gm21559-201ENSMUST00000220638 855 ntBASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Gm8587-201ENSMUST00000076538 843 ntBASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depdc1aQ8CIG0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Gm10566-201ENSMUST00000086739 996 ntBASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Depdc1aQ8CIG0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Depdc1aQ8CIG0 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.52■□□□□ 0.72
Depdc1aQ8CIG0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Depdc1aQ8CIG0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Depdc1aQ8CIG0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Depdc1aQ8CIG0 AA414768-201ENSMUST00000121924 1257 ntBASIC19.52■□□□□ 0.72
Depdc1aQ8CIG0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Depdc1aQ8CIG0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.52■□□□□ 0.72
Depdc1aQ8CIG0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Depdc1aQ8CIG0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Depdc1aQ8CIG0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms