Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Gm15375-201ENSMUST00000119510 849 ntBASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pdlim5Q8CI51 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Gm11249-201ENSMUST00000117071 859 ntBASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.98■□□□□ 0.15
Pdlim5Q8CI51 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Gm13401-201ENSMUST00000117074 291 ntBASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pdlim5Q8CI51 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pdlim5Q8CI51 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim5Q8CI51 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.96■□□□□ 0.14
Pdlim5Q8CI51 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pdlim5Q8CI51 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
Pdlim5Q8CI51 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.95■□□□□ 0.14
Pdlim5Q8CI51 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
Pdlim5Q8CI51 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim5Q8CI51 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Pdlim5Q8CI51 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms