Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Slc46a2Q8CA03 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Gm42569-201ENSMUST00000200539 472 ntBASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slc46a2Q8CA03 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Gm42778-201ENSMUST00000199644 553 ntBASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc46a2Q8CA03 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Gm7291-201ENSMUST00000199147 382 ntBASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a2Q8CA03 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a2Q8CA03 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Gm7514-201ENSMUST00000209475 934 ntBASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Zfp783-201ENSMUST00000095946 670 ntBASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms