Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
4933409G03RikQ8C5U0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
4933409G03RikQ8C5U0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Gm7213-201ENSMUST00000215977 950 ntBASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
4933409G03RikQ8C5U0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Gm14859-201ENSMUST00000117752 357 ntBASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
4933409G03RikQ8C5U0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Gm9013-201ENSMUST00000132939 882 ntBASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Mir8112-201ENSMUST00000184382 131 ntBASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.85■□□□□ 0.61
4933409G03RikQ8C5U0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.84■□□□□ 0.61
4933409G03RikQ8C5U0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
4933409G03RikQ8C5U0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
4933409G03RikQ8C5U0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
4933409G03RikQ8C5U0 Gm10819-201ENSMUST00000099988 561 ntBASIC18.83■□□□□ 0.6
4933409G03RikQ8C5U0 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.83■□□□□ 0.6
4933409G03RikQ8C5U0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
4933409G03RikQ8C5U0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
4933409G03RikQ8C5U0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
4933409G03RikQ8C5U0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
4933409G03RikQ8C5U0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933409G03RikQ8C5U0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933409G03RikQ8C5U0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933409G03RikQ8C5U0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933409G03RikQ8C5U0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
4933409G03RikQ8C5U0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms