Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Usp44Q8C2S0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp44Q8C2S0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp44Q8C2S0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.33■□□□□ 0.85
Usp44Q8C2S0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Usp44Q8C2S0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp44Q8C2S0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp44Q8C2S0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Usp44Q8C2S0 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.33■□□□□ 0.84
Usp44Q8C2S0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.33■□□□□ 0.84
Usp44Q8C2S0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Usp44Q8C2S0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Usp44Q8C2S0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.33■□□□□ 0.84
Usp44Q8C2S0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Usp44Q8C2S0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp44Q8C2S0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.32■□□□□ 0.84
Usp44Q8C2S0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Gm9731-201ENSMUST00000209480 747 ntBASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp44Q8C2S0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Il3ra-202ENSMUST00000223589 738 ntBASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp44Q8C2S0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Gm10252-201ENSMUST00000209541 832 ntBASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp44Q8C2S0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Gm37055-201ENSMUST00000191866 133 ntBASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp44Q8C2S0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp44Q8C2S0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms