Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps9d1Q8C190 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps9d1Q8C190 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps9d1Q8C190 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps9d1Q8C190 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps9d1Q8C190 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps9d1Q8C190 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps9d1Q8C190 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.27■□□□□ 0.2
Vps9d1Q8C190 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps9d1Q8C190 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps9d1Q8C190 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.27■□□□□ 0.19
Vps9d1Q8C190 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Vps9d1Q8C190 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps9d1Q8C190 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Vps9d1Q8C190 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Gm6211-202ENSMUST00000167849 925 ntBASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps9d1Q8C190 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps9d1Q8C190 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps9d1Q8C190 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps9d1Q8C190 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Vps9d1Q8C190 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps9d1Q8C190 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps9d1Q8C190 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps9d1Q8C190 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms