Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 AC173482.2-201ENSMUST00000224044 750 ntBASIC17.94■□□□□ 0.46
Trim35Q8C006 AC162940.1-201ENSMUST00000224745 1167 ntBASIC17.94■□□□□ 0.46
Trim35Q8C006 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim35Q8C006 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm10653-202ENSMUST00000139570 835 ntBASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm8581-201ENSMUST00000188636 890 ntBASIC17.93■□□□□ 0.46
Trim35Q8C006 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm43550-201ENSMUST00000200597 303 ntBASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm45610-201ENSMUST00000209227 784 ntBASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm35638-201ENSMUST00000220724 652 ntBASIC17.93■□□□□ 0.46
Trim35Q8C006 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.93■□□□□ 0.46
Trim35Q8C006 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim35Q8C006 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim35Q8C006 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trim35Q8C006 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.92■□□□□ 0.46
Trim35Q8C006 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim35Q8C006 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim35Q8C006 Gm20760-201ENSMUST00000179197 648 ntBASIC17.92■□□□□ 0.46
Trim35Q8C006 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim35Q8C006 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim35Q8C006 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim35Q8C006 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim35Q8C006 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim35Q8C006 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim35Q8C006 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim35Q8C006 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim35Q8C006 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Trim35Q8C006 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim35Q8C006 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.91■□□□□ 0.46
Trim35Q8C006 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim35Q8C006 Gm13033-201ENSMUST00000117591 1057 ntBASIC17.91■□□□□ 0.46
Trim35Q8C006 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim35Q8C006 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim35Q8C006 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim35Q8C006 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.91■□□□□ 0.46
Trim35Q8C006 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC17.91■□□□□ 0.46
Trim35Q8C006 AC154245.1-201ENSMUST00000224615 601 ntBASIC17.91■□□□□ 0.46
Trim35Q8C006 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim35Q8C006 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim35Q8C006 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim35Q8C006 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim35Q8C006 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim35Q8C006 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim35Q8C006 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim35Q8C006 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.91■□□□□ 0.46
Trim35Q8C006 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim35Q8C006 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim35Q8C006 Fst-202ENSMUST00000223640 2612 ntBASIC17.9■□□□□ 0.46
Trim35Q8C006 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim35Q8C006 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim35Q8C006 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim35Q8C006 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim35Q8C006 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim35Q8C006 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms