Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Usp43Q8BUM9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp43Q8BUM9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp43Q8BUM9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp43Q8BUM9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp43Q8BUM9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp43Q8BUM9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.57■□□□□ 0.4
Usp43Q8BUM9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp43Q8BUM9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp43Q8BUM9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp43Q8BUM9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp43Q8BUM9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Mir1199-201ENSMUST00000117015 119 ntBASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Gm22240-201ENSMUST00000175225 82 ntBASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp43Q8BUM9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp43Q8BUM9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.54■□□□□ 0.4
Usp43Q8BUM9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp43Q8BUM9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp43Q8BUM9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp43Q8BUM9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms