Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap1Q8BTW8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm16061-201ENSMUST00000122167 857 ntBASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Il3ra-202ENSMUST00000223589 738 ntBASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap1Q8BTW8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk5rap1Q8BTW8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
Cdk5rap1Q8BTW8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Gm13474-201ENSMUST00000122466 815 ntBASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdk5rap1Q8BTW8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Gm10013-201ENSMUST00000106074 672 ntBASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Gm17661-201ENSMUST00000170317 270 ntBASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdk5rap1Q8BTW8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms