Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cpsf7Q8BTV2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cpsf7Q8BTV2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cpsf7Q8BTV2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cpsf7Q8BTV2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Gm7514-201ENSMUST00000209475 934 ntBASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cpsf7Q8BTV2 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.37■□□□□ 0.37
Cpsf7Q8BTV2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Gm10418-201ENSMUST00000100943 576 ntBASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Cpsf7Q8BTV2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.35■□□□□ 0.37
Cpsf7Q8BTV2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf7Q8BTV2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf7Q8BTV2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf7Q8BTV2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.34■□□□□ 0.37
Cpsf7Q8BTV2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf7Q8BTV2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf7Q8BTV2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf7Q8BTV2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf7Q8BTV2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf7Q8BTV2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpsf7Q8BTV2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms