Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scfd1Q8BRF7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scfd1Q8BRF7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.87■□□□□ 0.77
Scfd1Q8BRF7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scfd1Q8BRF7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Scfd1Q8BRF7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scfd1Q8BRF7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scfd1Q8BRF7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Gm7367-201ENSMUST00000057611 492 ntBASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scfd1Q8BRF7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Gm33142-201ENSMUST00000193913 867 ntBASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scfd1Q8BRF7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scfd1Q8BRF7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Scfd1Q8BRF7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Scfd1Q8BRF7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.83■□□□□ 0.76
Scfd1Q8BRF7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scfd1Q8BRF7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scfd1Q8BRF7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scfd1Q8BRF7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scfd1Q8BRF7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Scfd1Q8BRF7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scfd1Q8BRF7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scfd1Q8BRF7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scfd1Q8BRF7 Gm9013-201ENSMUST00000132939 882 ntBASIC19.81■□□□□ 0.76
Scfd1Q8BRF7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.81■□□□□ 0.76
Scfd1Q8BRF7 Gm18958-201ENSMUST00000174258 762 ntBASIC19.81■□□□□ 0.76
Scfd1Q8BRF7 Gm5587-201ENSMUST00000206270 674 ntBASIC19.81■□□□□ 0.76
Scfd1Q8BRF7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scfd1Q8BRF7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms