Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Suds3Q8BR65 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Gm11927-201ENSMUST00000118472 759 ntBASIC17.8■□□□□ 0.44
Suds3Q8BR65 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.8■□□□□ 0.44
Suds3Q8BR65 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Mtag2-201ENSMUST00000058665 714 ntBASIC17.8■□□□□ 0.44
Suds3Q8BR65 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Suds3Q8BR65 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.79■□□□□ 0.44
Suds3Q8BR65 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Suds3Q8BR65 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Suds3Q8BR65 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.77■□□□□ 0.44
Suds3Q8BR65 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Suds3Q8BR65 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Suds3Q8BR65 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Suds3Q8BR65 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Suds3Q8BR65 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.76■□□□□ 0.43
Suds3Q8BR65 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Gm5643-201ENSMUST00000117081 966 ntBASIC17.76■□□□□ 0.43
Suds3Q8BR65 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Suds3Q8BR65 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms