Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Col16a1Q8BLX7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col16a1Q8BLX7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col16a1Q8BLX7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col16a1Q8BLX7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col16a1Q8BLX7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC22.85■■□□□ 1.25
Col16a1Q8BLX7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col16a1Q8BLX7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col16a1Q8BLX7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col16a1Q8BLX7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Col16a1Q8BLX7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC22.84■■□□□ 1.25
Col16a1Q8BLX7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Col16a1Q8BLX7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Col16a1Q8BLX7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col16a1Q8BLX7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Col16a1Q8BLX7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
Col16a1Q8BLX7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col16a1Q8BLX7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col16a1Q8BLX7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Col16a1Q8BLX7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Col16a1Q8BLX7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
Col16a1Q8BLX7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Col16a1Q8BLX7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Col16a1Q8BLX7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Col16a1Q8BLX7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col16a1Q8BLX7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col16a1Q8BLX7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Col16a1Q8BLX7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col16a1Q8BLX7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col16a1Q8BLX7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col16a1Q8BLX7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col16a1Q8BLX7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Col16a1Q8BLX7 Gm27525-201ENSMUST00000184465 107 ntBASIC22.81■■□□□ 1.24
Col16a1Q8BLX7 AC125350.1-201ENSMUST00000225115 903 ntBASIC22.81■■□□□ 1.24
Col16a1Q8BLX7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC22.81■■□□□ 1.24
Col16a1Q8BLX7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Col16a1Q8BLX7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Col16a1Q8BLX7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col16a1Q8BLX7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col16a1Q8BLX7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Col16a1Q8BLX7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Col16a1Q8BLX7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col16a1Q8BLX7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Col16a1Q8BLX7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col16a1Q8BLX7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col16a1Q8BLX7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col16a1Q8BLX7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col16a1Q8BLX7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC22.79■■□□□ 1.24
Col16a1Q8BLX7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC22.79■■□□□ 1.24
Col16a1Q8BLX7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
Col16a1Q8BLX7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col16a1Q8BLX7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col16a1Q8BLX7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col16a1Q8BLX7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col16a1Q8BLX7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col16a1Q8BLX7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Col16a1Q8BLX7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC22.78■■□□□ 1.24
Col16a1Q8BLX7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col16a1Q8BLX7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Col16a1Q8BLX7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col16a1Q8BLX7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col16a1Q8BLX7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col16a1Q8BLX7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms