Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trpa1Q8BLA8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trpa1Q8BLA8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trpa1Q8BLA8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trpa1Q8BLA8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trpa1Q8BLA8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trpa1Q8BLA8 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trpa1Q8BLA8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trpa1Q8BLA8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trpa1Q8BLA8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trpa1Q8BLA8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trpa1Q8BLA8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Gm715-201ENSMUST00000117865 831 ntBASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpa1Q8BLA8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Gm13401-201ENSMUST00000117074 291 ntBASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Gm6576-201ENSMUST00000169678 883 ntBASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpa1Q8BLA8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpa1Q8BLA8 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.17■□□□□ 0.5
Trpa1Q8BLA8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.17■□□□□ 0.5
Trpa1Q8BLA8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms