Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Srrm4Q8BKA3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.05■□□□□ 0
Srrm4Q8BKA3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.05■□□□□ 0
Srrm4Q8BKA3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Srrm4Q8BKA3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Srrm4Q8BKA3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Srrm4Q8BKA3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.05■□□□□ 0
Srrm4Q8BKA3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Srrm4Q8BKA3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Gm10418-201ENSMUST00000100943 576 ntBASIC15.05■□□□□ -0
Srrm4Q8BKA3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Gm715-201ENSMUST00000117865 831 ntBASIC15.05■□□□□ -0
Srrm4Q8BKA3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Srrm4Q8BKA3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Srrm4Q8BKA3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm4Q8BKA3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.03■□□□□ -0
Srrm4Q8BKA3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Gm29791-202ENSMUST00000207888 369 ntBASIC15.03■□□□□ -0
Srrm4Q8BKA3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Srrm4Q8BKA3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm4Q8BKA3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.02■□□□□ -0
Srrm4Q8BKA3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.02■□□□□ -0
Srrm4Q8BKA3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm4Q8BKA3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.02■□□□□ -0
Srrm4Q8BKA3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Srrm4Q8BKA3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.02■□□□□ -0
Srrm4Q8BKA3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.02■□□□□ -0
Srrm4Q8BKA3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.02■□□□□ -0
Srrm4Q8BKA3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm4Q8BKA3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.02■□□□□ -0
Srrm4Q8BKA3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm4Q8BKA3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.02□□□□□ -0.01
Srrm4Q8BKA3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm4Q8BKA3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm4Q8BKA3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms