Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.63■□□□□ 0.57
Nop53Q8BK35 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nop53Q8BK35 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.63■□□□□ 0.57
Nop53Q8BK35 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nop53Q8BK35 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Gm12527-201ENSMUST00000117967 564 ntBASIC18.62■□□□□ 0.57
Nop53Q8BK35 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop53Q8BK35 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nop53Q8BK35 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.61■□□□□ 0.57
Nop53Q8BK35 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.61■□□□□ 0.57
Nop53Q8BK35 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Gm5408-201ENSMUST00000197998 747 ntBASIC18.61■□□□□ 0.57
Nop53Q8BK35 Gm29791-202ENSMUST00000207888 369 ntBASIC18.61■□□□□ 0.57
Nop53Q8BK35 Gm44549-201ENSMUST00000208351 577 ntBASIC18.61■□□□□ 0.57
Nop53Q8BK35 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop53Q8BK35 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.61■□□□□ 0.57
Nop53Q8BK35 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nop53Q8BK35 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.61■□□□□ 0.57
Nop53Q8BK35 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Gm10653-202ENSMUST00000139570 835 ntBASIC18.6■□□□□ 0.57
Nop53Q8BK35 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.6■□□□□ 0.57
Nop53Q8BK35 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.6■□□□□ 0.57
Nop53Q8BK35 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.6■□□□□ 0.57
Nop53Q8BK35 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Zfp783-201ENSMUST00000095946 670 ntBASIC18.6■□□□□ 0.57
Nop53Q8BK35 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nop53Q8BK35 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Nop53Q8BK35 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.59■□□□□ 0.57
Nop53Q8BK35 Flg-201ENSMUST00000050758 1488 ntBASIC18.59■□□□□ 0.57
Nop53Q8BK35 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nop53Q8BK35 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Gm26524-201ENSMUST00000192339 390 ntBASIC18.59■□□□□ 0.57
Nop53Q8BK35 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.59■□□□□ 0.57
Nop53Q8BK35 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nop53Q8BK35 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nop53Q8BK35 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nop53Q8BK35 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nop53Q8BK35 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nop53Q8BK35 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.58■□□□□ 0.57
Nop53Q8BK35 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nop53Q8BK35 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nop53Q8BK35 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nop53Q8BK35 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nop53Q8BK35 Gm10418-201ENSMUST00000100943 576 ntBASIC18.58■□□□□ 0.56
Nop53Q8BK35 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Nop53Q8BK35 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.58■□□□□ 0.56
Nop53Q8BK35 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Nop53Q8BK35 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nop53Q8BK35 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nop53Q8BK35 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms