Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.79■□□□□ 0.44
Chmp2bQ8BJF9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Chmp2bQ8BJF9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Mir8112-201ENSMUST00000184382 131 ntBASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Gm26524-201ENSMUST00000192339 390 ntBASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Chmp2bQ8BJF9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2bQ8BJF9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2bQ8BJF9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2bQ8BJF9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2bQ8BJF9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Chmp2bQ8BJF9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chmp2bQ8BJF9 Flg-201ENSMUST00000050758 1488 ntBASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chmp2bQ8BJF9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms