Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Samm50Q8BGH2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Gm18666-201ENSMUST00000190039 958 ntBASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Gm10812-201ENSMUST00000099864 546 ntBASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.35■□□□□ 0.85
Samm50Q8BGH2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Gm5643-201ENSMUST00000117081 966 ntBASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Gm13158-201ENSMUST00000122007 736 ntBASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Samm50Q8BGH2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Samm50Q8BGH2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Samm50Q8BGH2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.33■□□□□ 0.85
Samm50Q8BGH2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.33■□□□□ 0.85
Samm50Q8BGH2 Zfp783-201ENSMUST00000095946 670 ntBASIC20.33■□□□□ 0.85
Samm50Q8BGH2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Samm50Q8BGH2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Samm50Q8BGH2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Samm50Q8BGH2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Samm50Q8BGH2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Samm50Q8BGH2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Samm50Q8BGH2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Samm50Q8BGH2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Samm50Q8BGH2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.31■□□□□ 0.84
Samm50Q8BGH2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Samm50Q8BGH2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Samm50Q8BGH2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Samm50Q8BGH2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.31■□□□□ 0.84
Samm50Q8BGH2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Samm50Q8BGH2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Samm50Q8BGH2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Samm50Q8BGH2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Samm50Q8BGH2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Samm50Q8BGH2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Samm50Q8BGH2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms