Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubp1Q811S7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.1■□□□□ 0.33
Ubp1Q811S7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubp1Q811S7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.09■□□□□ 0.33
Ubp1Q811S7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.09■□□□□ 0.33
Ubp1Q811S7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Gm4974-201ENSMUST00000209974 875 ntBASIC17.09■□□□□ 0.33
Ubp1Q811S7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ubp1Q811S7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.08■□□□□ 0.33
Ubp1Q811S7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubp1Q811S7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ubp1Q811S7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ubp1Q811S7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ubp1Q811S7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ubp1Q811S7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.08■□□□□ 0.32
Ubp1Q811S7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.08■□□□□ 0.32
Ubp1Q811S7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.08■□□□□ 0.32
Ubp1Q811S7 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.08■□□□□ 0.32
Ubp1Q811S7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubp1Q811S7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ubp1Q811S7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ubp1Q811S7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ubp1Q811S7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.07■□□□□ 0.32
Ubp1Q811S7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ubp1Q811S7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Ubp1Q811S7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.06■□□□□ 0.32
Ubp1Q811S7 Gm12085-201ENSMUST00000119263 940 ntBASIC17.06■□□□□ 0.32
Ubp1Q811S7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ubp1Q811S7 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.06■□□□□ 0.32
Ubp1Q811S7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ubp1Q811S7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.05■□□□□ 0.32
Ubp1Q811S7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms