Protein–RNA interactions for Protein: Q810N9

Ccdc172, Coiled-coil domain-containing protein 172, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc172Q810N9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc172Q810N9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc172Q810N9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc172Q810N9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc172Q810N9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc172Q810N9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc172Q810N9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc172Q810N9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Mir5122-201ENSMUST00000175004 89 ntBASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Timm23-208ENSMUST00000226683 750 ntBASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc172Q810N9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Gm24841-201ENSMUST00000158676 357 ntBASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc172Q810N9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc172Q810N9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc172Q810N9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms