Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh8Q7TSK3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh8Q7TSK3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdh8Q7TSK3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdh8Q7TSK3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh8Q7TSK3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh8Q7TSK3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh8Q7TSK3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdh8Q7TSK3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Gm29791-202ENSMUST00000207888 369 ntBASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh8Q7TSK3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh8Q7TSK3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms