Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Exosc3Q7TQK4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Gm12085-201ENSMUST00000119263 940 ntBASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Exosc3Q7TQK4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Exosc3Q7TQK4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Gm21814-202ENSMUST00000203277 873 ntBASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Exosc3Q7TQK4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Gm38027-201ENSMUST00000192315 235 ntBASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Gm3375-201ENSMUST00000203929 796 ntBASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Exosc3Q7TQK4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Exosc3Q7TQK4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Exosc3Q7TQK4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.93■□□□□ 0.14
Exosc3Q7TQK4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms