Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.66■□□□□ 0.9
Nup188Q6ZQH8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nup188Q6ZQH8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nup188Q6ZQH8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Gm5864-201ENSMUST00000202263 970 ntBASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nup188Q6ZQH8 Gm11336-201ENSMUST00000118168 334 ntBASIC20.64■□□□□ 0.9
Nup188Q6ZQH8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Nup188Q6ZQH8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Nup188Q6ZQH8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
Nup188Q6ZQH8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
Nup188Q6ZQH8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
Nup188Q6ZQH8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nup188Q6ZQH8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.64■□□□□ 0.9
Nup188Q6ZQH8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nup188Q6ZQH8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nup188Q6ZQH8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nup188Q6ZQH8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nup188Q6ZQH8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nup188Q6ZQH8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.63■□□□□ 0.89
Nup188Q6ZQH8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup188Q6ZQH8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup188Q6ZQH8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nup188Q6ZQH8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup188Q6ZQH8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup188Q6ZQH8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup188Q6ZQH8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nup188Q6ZQH8 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Gm37935-201ENSMUST00000192012 982 ntBASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nup188Q6ZQH8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Gm13186-201ENSMUST00000118031 316 ntBASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nup188Q6ZQH8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nup188Q6ZQH8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Gm43347-201ENSMUST00000200226 580 ntBASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Gm18421-201ENSMUST00000204122 625 ntBASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Gm18206-201ENSMUST00000207027 926 ntBASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup188Q6ZQH8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms