Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Gm27275-201ENSMUST00000184318 272 ntBASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Kdm1aQ6ZQ88 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kdm1aQ6ZQ88 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kdm1aQ6ZQ88 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Kdm1aQ6ZQ88 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Kdm1aQ6ZQ88 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kdm1aQ6ZQ88 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kdm1aQ6ZQ88 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Gm18025-201ENSMUST00000221733 862 ntBASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kdm1aQ6ZQ88 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms