Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Npc1l1Q6T3U4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Gm9731-201ENSMUST00000209480 747 ntBASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Npc1l1Q6T3U4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Gm16061-201ENSMUST00000122167 857 ntBASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Gm27741-201ENSMUST00000185060 237 ntBASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Npc1l1Q6T3U4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Gm7791-201ENSMUST00000219066 539 ntBASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Npc1l1Q6T3U4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Gm17661-201ENSMUST00000170317 270 ntBASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Gm22697-201ENSMUST00000175194 63 ntBASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1l1Q6T3U4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1l1Q6T3U4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1l1Q6T3U4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.77■□□□□ 0.92
Npc1l1Q6T3U4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Npc1l1Q6T3U4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1l1Q6T3U4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.77■□□□□ 0.92
Npc1l1Q6T3U4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1l1Q6T3U4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Npc1l1Q6T3U4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Npc1l1Q6T3U4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.77■□□□□ 0.91
Npc1l1Q6T3U4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Npc1l1Q6T3U4 Gm18101-201ENSMUST00000215769 548 ntBASIC20.77■□□□□ 0.91
Npc1l1Q6T3U4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Npc1l1Q6T3U4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Npc1l1Q6T3U4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms