Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Gm7213-201ENSMUST00000215977 950 ntBASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx58Q6Q899 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx58Q6Q899 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx58Q6Q899 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx58Q6Q899 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx58Q6Q899 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.48■■□□□ 1.03
Ddx58Q6Q899 Gm21559-201ENSMUST00000220638 855 ntBASIC21.48■■□□□ 1.03
Ddx58Q6Q899 Gm8587-201ENSMUST00000076538 843 ntBASIC21.48■■□□□ 1.03
Ddx58Q6Q899 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Ddx58Q6Q899 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx58Q6Q899 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx58Q6Q899 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx58Q6Q899 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Gm6345-202ENSMUST00000180900 204 ntBASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Gm27389-201ENSMUST00000183622 195 ntBASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx58Q6Q899 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx58Q6Q899 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Ddx58Q6Q899 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx58Q6Q899 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.44■■□□□ 1.02
Ddx58Q6Q899 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx58Q6Q899 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.44■■□□□ 1.02
Ddx58Q6Q899 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ddx58Q6Q899 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx58Q6Q899 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx58Q6Q899 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Ddx58Q6Q899 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx58Q6Q899 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.44■■□□□ 1.02
Ddx58Q6Q899 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx58Q6Q899 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx58Q6Q899 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx58Q6Q899 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx58Q6Q899 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx58Q6Q899 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx58Q6Q899 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx58Q6Q899 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx58Q6Q899 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx58Q6Q899 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx58Q6Q899 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms