Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smarcc2Q6PDG5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smarcc2Q6PDG5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Smarcc2Q6PDG5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smarcc2Q6PDG5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smarcc2Q6PDG5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Gm12382-201ENSMUST00000122005 922 ntBASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Gm37292-201ENSMUST00000192062 758 ntBASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smarcc2Q6PDG5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smarcc2Q6PDG5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Smarcc2Q6PDG5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 Gm715-201ENSMUST00000117865 831 ntBASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc2Q6PDG5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms