Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim37Q6PCX9 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.27■□□□□ 0.68
Trim37Q6PCX9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim37Q6PCX9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim37Q6PCX9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim37Q6PCX9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim37Q6PCX9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Gm27463-201ENSMUST00000183569 57 ntBASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim37Q6PCX9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Gm27704-201ENSMUST00000185094 107 ntBASIC19.25■□□□□ 0.67
Trim37Q6PCX9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.25■□□□□ 0.67
Trim37Q6PCX9 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim37Q6PCX9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Tgds-204ENSMUST00000228543 1594 ntBASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim37Q6PCX9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim37Q6PCX9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim37Q6PCX9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trim37Q6PCX9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim37Q6PCX9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim37Q6PCX9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim37Q6PCX9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim37Q6PCX9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.23■□□□□ 0.67
Trim37Q6PCX9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim37Q6PCX9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim37Q6PCX9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Gm2274-201ENSMUST00000184539 609 ntBASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Gm8969-201ENSMUST00000199694 526 ntBASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim37Q6PCX9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim37Q6PCX9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms