Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcf1Q6P542 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.44■□□□□ 0.7
Abcf1Q6P542 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.44■□□□□ 0.7
Abcf1Q6P542 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.44■□□□□ 0.7
Abcf1Q6P542 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcf1Q6P542 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.43■□□□□ 0.7
Abcf1Q6P542 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Abcf1Q6P542 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Abcf1Q6P542 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf1Q6P542 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.42■□□□□ 0.7
Abcf1Q6P542 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcf1Q6P542 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Abcf1Q6P542 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.41■□□□□ 0.7
Abcf1Q6P542 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcf1Q6P542 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms